PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01700.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 371aa    MW: 41362.6 Da    PI: 5.1759
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01700.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.4e-12193238454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h ++Er+RR+++ ++f  L  l+P +     kK++Ka++L  A+eY+k+L
  KHN01700.1 193 DHIMAERKRREKLSQSFIALAALVPGL-----KKMDKASVLGDAIEYVKEL 238
                 699************************.....9****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.574189238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-9193238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-17193254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.35E-13194242No hitNo description
SuperFamilySSF474592.09E-16194255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.2E-14195244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MMEELNKPMD GSATSWLSDL EMDDYNLFPD ECPLNLNMFD DREFLSQDIA SAFQEQTQTL  60
QQQSLSSECP SKTVSNSSTD ETIFDFERPS KLLKTTTSTS SNFDSSTITK TLSPKLSPSS  120
SFQSQILSFD NTNTQFYEFH CTLNPTQNEM VSVSVPQKGK PRFPTQTPKG SPKYQNFETK  180
TSHAKRSPAH AQDHIMAERK RREKLSQSFI ALAALVPGLK KMDKASVLGD AIEYVKELKE  240
RLTVLEEQSK KTRAESIVVL NKPDLSGDND SSSCDESIDA DSVSDSLFEV ESRVSGKEML  300
LKIHCQKQRG LLVKLLAEIQ SNHLFVANSS VLPFGNSILD ITIVAQMGES YNLTTKELAK  360
NLRVAALKIL S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197202ERKRRE
2198203RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311250.0KT031125.1 Glycine max clone HN_CCL_79 bHLH transcription factor (Glyma17g16720.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003549987.10.0PREDICTED: transcription factor bHLH18-like
TrEMBLA0A0B2NXC50.0A0A0B2NXC5_GLYSO; Transcription factor bHLH25
STRINGGLYMA17G16720.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110691238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-53bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]